Index

A

accept() (DateFilter method) acs acs1 acs5 action (LoaderConfig attribute), [1] Activity (class in nsaph.loader.monitor) add() (Tester method) add_column() (Table method) add_column_from_master() (Table method) add_column_from_sql() (Table method) add_column_indices() (Domain method) add_data() (Table method) add_edge() (Graph method) add_fk_validation() (Domain method) add_geoid() (DataPlan method), [1] add_gis_columns() (in module nsaph.adi) (in module nsaph.link_gis) add_header() (MDCreator method) add_header_row() (in module nsaph.dictionary.element) add_html_row() (in module nsaph.dictionary.element) add_image() (MDCreator method) add_index() (Dataset method) (Domain method) add_index_by_ddl() (Domain method) add_indices() (MedicareFTS method) add_master_columns() (Table method) add_monitor_key() (in module epa.aqs_tools) add_multi_column_indices() (Domain method) add_node() (Graph method) add_predecessors_for_column() (Table method) add_row() (in module nsaph.dictionary.element) add_sas_table() (SASIntrospector method) add_state_fips() (in module nsaph.util.pg_json_dump) add_table() (MDCreator method) (QueryBuilder method) add_text() (MDCreator method) add_to() (Argument method) add_url() (DownloadTask method) adjust_geo_fields() (DataPlan method), [1] affine (nsaph_gis.compute_shape.StatsCounter.prepare_stats parameter) (nsaph_gis.compute_shape.StatsCounter.process parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers_return_dict parameter) aggregation (AQSContext attribute) Aggregation (class in epa.aqs_ds_def) (class in nsaph.dictionary.tables) aggregation (epa.aqs_tools.collect_aqs_download_tasks parameter) (OutputType attribute) AggregationError Aggregator (class in cms.aggregates) (class in gridmet.aggregator) AirNow (class in epa.airnow)

AirNowContext (class in epa.airnow_ds_def) AirNowDownloader (class in epa.airnow_downloader) AliasColumn (class in cms.fts2yaml) aliases (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] all (Geography attribute) all_tables() (in module nsaph.requests.query) all_touched (RasterizationStrategy attribute), [1] analyze() (Table method) analyze_format() (FTSColumn method) analyze_inconsistent_age() (DuplicatesExplorer method) anchor (nsaph.data_model.model.Table.make_iso_column parameter) ANNUAL (Aggregation attribute) api_geography() (in module census.query), [1] api_key (AirNowContext attribute) (epa.airnow_downloader.AirNowDownloader parameter) app_name() (in module nsaph) append (epa.aqs_tools.download_data parameter) append() (Dataset method) (in module nsaph.requests.hdf5_export) append_ddl() (Domain method) append_file_column() (Introspector method) append_record_column() (Introspector method) append_sql_column() (Introspector method) AQS (class in epa.aqs) AQSContext (class in epa.aqs_ds_def) arg() (ColumnAttribute method), [1] args() (in module cms.duplicates) (in module cms.random_selector) (in module cms.tools.mcr_create_test_data) (in module cms.tools.medpar_converter) Argument (class in nsaph_utils.utils.context), [1], [2], [3] array() (PointInRaster method) as_content() (in module nsaph_utils.utils.io_utils), [1] as_csv_reader() (in module nsaph_utils.utils.io_utils), [1] as_dict() (in module nsaph_utils.utils.io_utils) (Inputs class method) as_edge_attr() (Relation method) as_stream() (in module nsaph_utils.utils.io_utils), [1] assemble_data() (DataPlan method), [1] attr (census.cli.CensusContext.validate parameter), [1] (census.interpolate_data.CensusInterpolateContext.validate parameter) (epa.airnow_ds_def.AirNowContext.validate parameter) (epa.aqs_ds_def.AQSContext.validate parameter) (gridmet.config.GridContext.validate parameter) (gridmet.config.GridMETContext.validate parameter) (nsaph.loader.loader_config.LoaderConfig.validate parameter), [1] (nsaph_utils.utils.context.Context.validate parameter), [1], [2], [3] (tests.test_cli_context.MadeUpContext.validate parameter) attrs2string() (in module nsaph.dictionary.element) auto (RasterizationStrategy attribute), [1] autocommit (DBConnectionConfig attribute), [1] aws_default_region (Connection attribute) aws_default_secret_name (Connection attribute)

B

bad_lines (FWFReader attribute) bands (Parallel attribute) basename() (in module nsaph.data_model.utils) (in module nsaph_utils.utils.io_utils), [1] Batch() (Inserter method) batch() (PgPqSingleQuery method) batches() (PgPqSingleQuery method) bi (GridmetVariable attribute), [1]

bilinear() (PointInRaster method) BLOCK_SIZE (DownloadGridmetTask attribute) BlockingThreadPoolExecutor (class in nsaph.util.executors) buffer (LoaderConfig attribute), [1] build() (IndexBuilder method) build_indices() (Table method) built_in_registry_path() (Registry static method), [1] by_var (nsaph_utils.interpolation.interface.interpolate parameter)

C

calc_weights() (in module nsaph_utils.interpolation.interpolate_ma) calculate_column_lineage() (Table method) calculate_densities() (DataPlan method), [1] calculate_var() (VariableDef method), [1] Cardinality (class in nsaph_utils.utils.context), [1], [2] cardinality (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] categorical (CType attribute) CATEGORICAL_THRESHOLD (TableFingerprint attribute) census.assemble_data module, [1] census.calculate_density module census.census_info module, [1] census.cli module, [1] census.data.load_data module, [1] census.do_qc module census.exceptions module, [1] census.interpolate_data module census.query module, [1] census.tigerweb module, [1] census.utils module, [1] census.write_data module census_cli() (in module census.cli) census_years() (in module census.census_info), [1] CensusContext (class in census.cli), [1] CensusDensityContext (class in census.calculate_density) CensusException, [1] CensusInterpolateContext (class in census.interpolate_data) CensusQCContext (class in census.do_qc) CensusShapeCollection (class in nsaph_gis.downloader) CensusWriteContext (class in census.write_data) cfg (AirNowContext attribute) check() (Test method) (Tester method) check_http_response() (in module nsaph_utils.utils.io_utils), [1] check_key_columns() (MedicareFTS method) check_shape_file() (in module gridmet.gridmet_tools) check_size (nsaph_utils.utils.io_utils.is_downloaded parameter), [1] classify() (Introspector class method) clear() (AQS method) (Dataset method) (QueryBuilder method) close() (Connection method) (CSVLikeJsonReader method) (DataLoader method) (FWFReader method) cls (epa.airnow_ds_def.AirNowContext.enum parameter) (epa.aqs_ds_def.AQSContext.enum parameter) (nsaph_utils.utils.context.Context.enum parameter), [1], [2], [3] cms.aggregates module cms.create_schema_config module cms.duplicates module cms.init_cms_db module cms.mcr_data_loader module cms.random_selector module cms.registry module cms.table_population module cms.tools.mcr_combine_tables module cms.tools.mcr_create_test_data module cms.tools.mcr_file module cms.tools.mcr_fts2csv module cms.tools.mcr_fts2db module cms.tools.mcr_registry module cms.tools.mcr_sas module cms.tools.mcr_sas2db module cms.tools.mcr_sas2yaml module cms.tools.medpar_converter module CMSSchema (class in cms.create_schema_config) CO (Parameter attribute) collect() (in module nsaph.util.cwl_collect_outputs) (ModuleCollector method) collect_annual_downloads() (in module epa.aqs_tools) collect_aqs_download_tasks() (in module epa.aqs_tools) collect_daily_downloads() (in module epa.aqs_tools) collect_data() (Aggregator method) (ComputeGridmetTask method) collect_downloads() (AQS method) collect_tables() (in module nsaph.requests.query)

collect_tasks() (Gridmet method) Collector (class in gridmet.task) (class in nsaph_utils.utils.io_utils), [1] Column (class in cms.tools.mcr_file) (class in nsaph.dbt.create_test) (class in nsaph.dictionary.columns) column_lineage_to_dot() (Table method) column_names() (FWFReader method) column_spec() (Domain method) ColumnAttribute (class in cms.fts2yaml) (class in cms.tools.mcr_file) ColumnDef (class in cms.tools.mcr_file) ColumnLink (class in nsaph.dictionary.tables) ColumnReader (class in cms.fts2yaml) columns (cms.fts2yaml.MedicaidFTS.on_after_read_file parameter) (cms.fts2yaml.MedicareFTS.on_after_read_file parameter) (FWFMeta attribute) (nsaph_gis.annotator.GISAnnotator parameter) combined (RasterizationStrategy attribute), [1] commit() (DataLoader method) COMMON_COLUMNS (Registry attribute) CommonConfig (class in nsaph.loader.common), [1] COMPLETELY_MASKED (PointInRaster attribute) compress (AirNowContext attribute) (AQSContext attribute) (Context attribute), [1], [2], [3] compute() (Aggregator method) (in module nsaph.data_model.inserter) compute_one_day() (ComputeGridmetTask method), [1] (ComputePointsTask method), [1] (ComputeShapesTask method), [1] ComputeGridmetTask (class in gridmet.task), [1] ComputePointsTask (class in gridmet.task), [1] ComputeShapesTask (class in gridmet.task), [1] Condition (class in nsaph_utils.qc.tester) connect() (Connection method) connect_to_database() (Connection method) connect_via_tunnel() (Connection method) Connection (class in nsaph.db) connection (DBConnectionConfig attribute), [1] connection_name (Inputs attribute) (nsaph.requests.hdf5_export.export parameter) content (epa.airnow_downloader.AirNowDownloader.process parameter) Context (class in nsaph_utils.utils.context), [1], [2], [3] context (epa.aqs.AQS parameter) (gridmet.launcher.Gridmet parameter) (gridmet.netCDF_file_processor.NetCDFFile parameter) (gridmet.task.GridmetTask parameter), [1] (gridmet.task.GridmetTask.destination_file_name parameter), [1] (gridmet.task.GridmetTask.find_shape_file parameter), [1] (nsaph.loader.project_loader.ProjectLoader parameter) (pollution.wustl_file_processor.WUSTLFile parameter) contiguous_year_segment (epa.aqs_tools.collect_annual_downloads parameter) (epa.aqs_tools.collect_daily_downloads parameter) conv() (FTSColumn class method) (MedicareFTSColumn class method) convert() (in module cms.tools.mcr_fts2csv) (MedparConverter method) convert_dataset() (MedparConverter static method) coordinates (GridContext attribute) (gridmet.task.ComputePointsTask parameter), [1] copy_data() (Table method) copy_tool() (CWLGenerator method) count() (Aggregator method) count_lines() (in module gridmet.task) (in module nsaph_utils.utils.io_utils) count_lines_in_dest() (MedicareFile method) count_lines_in_source() (MedicareFile method) count_missing (Condition attribute) county (census.assemble_data.DataPlan parameter), [1] (census.assemble_data.VariableDef.calculate_var parameter), [1] (census.assemble_data.VariableDef.do_query parameter), [1] (census.query.get_census_data parameter), [1] (Geography attribute) COUNTY_COLUMNS (Registry attribute) COUNTY_TEMPLATE (GISDownloader attribute) CREATE (Domain attribute) create() (Domain method) (DomainOperations class method) (Table method) create_docker_requirement() (CWLGenerator static method) create_domain_yaml() (Registry static method) create_expression_requirements() (CWLGenerator static method) create_missingness() (DataPlan method), [1] create_network_requirement() (CWLGenerator static method) create_object_from() (Domain method) create_table() (Domain method) (in module nsaph.create) create_table_yaml() (Registry method) create_true_table() (Domain method) create_yaml() (Registry method) critical (Severity attribute) crs (nsaph_gis.annotator.GISAnnotator parameter) csv_reader() (in module nsaph.data_model.model) (Introspector static method) CSVFileWrapper (class in nsaph_utils.utils.io_utils), [1] CSVLikeJsonReader (class in nsaph.data_model.utils) CSVWriter (class in gridmet.task) (class in nsaph_utils.utils.io_utils), [1] CType (class in nsaph.dbt.create_test) cursor (nsaph.data_model.model.Table.make_iso_column parameter) custom (Geography attribute) CustomColumn (class in nsaph.data_model.model) CWLAppRunnerGenerator (class in nsaph.apprunner.app_run_generator) CWLGenerator (class in nsaph.util.cwl_generator) CWLParser (class in nsaph_utils.docutils.cwl2md) CWLTestGenerator (class in nsaph.dbt.gen_dbt_cwl)

D

d (FWFColumn attribute) DAILY (Aggregation attribute) dat4fts() (MedicareDataLoader class method) dat_path() (FTSTuple method) data (cms.tools.mcr_file.MedicareFile.read_record parameter) (EPAConfig attribute) (LoaderConfig attribute), [1] (nsaph_utils.interpolation.interface.interpolate parameter) data_dictionary (OutputType attribute) data_type (Condition attribute) database (Inputs attribute) DataLoader (class in nsaph.loader.data_loader) DataLoaderAction (class in nsaph.loader.loader_config), [1] DataModelElement (class in nsaph.dictionary.element) DataPlan (class in census.assemble_data), [1] DataReader (class in nsaph.data_model.utils) dataset (census.census_info.get_endpoint parameter), [1] (census.census_info.get_varlist parameter), [1] (census.query.get_census_data parameter), [1] Dataset (class in nsaph.requests.hdf5_export) dataset (gridmet.gridmet_tools.get_days parameter), [1] (gridmet.gridmet_tools.get_variable parameter), [1] dataset() (MedparConverter class method) date (CType attribute) date_filter (gridmet.task.ComputeGridmetTask parameter), [1] (gridmet.task.ComputeShapesTask parameter), [1] DateFilter (class in gridmet.config) dates (GridContext attribute) (GridMETContext attribute) day (gridmet.task.ComputeGridmetTask.compute_one_day parameter), [1] (gridmet.task.ComputePointsTask.compute_one_day parameter), [1] (gridmet.task.ComputeShapesTask.compute_one_day parameter), [1] days (Parallel attribute) db (DBConnectionConfig attribute), [1] db_ini (nsaph.requests.hdf5_export.export parameter) db_type() (Introspector static method) DBActivityMonitor (class in nsaph.loader.monitor) DBConnectionConfig (class in nsaph.loader.common), [1] DBMonitorConfig (class in nsaph.loader.monitor) DBTableConfig (class in nsaph.loader.common), [1] DBTConfig (class in nsaph.dbt.dbt_config) DBTRunner (class in nsaph.dbt.dbt_runner) ddl_for_node() (Domain method) debug (Severity attribute) dec DEF_OUPUT_TYPE (CWLAppRunnerGenerator attribute) default (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] (RasterizationStrategy attribute), [1] default() (Context method) default_filename (Connection attribute) default_port() (Connection static method) default_section (Connection attribute) describe() (Column method) describe_column_type() (Table method) describe_html() (Column method) (Table method) description (census.calculate_density.CensusDensityContext parameter) (census.cli.CensusContext parameter), [1] (census.do_qc.CensusQCContext parameter) (census.interpolate_data.CensusInterpolateContext parameter) (census.write_data.CensusWriteContext parameter) (cms.create_schema_config.CMSSchema parameter) (cms.table_population.PopulateConfig parameter) (epa.registry.EPAConfig parameter) (GridContext attribute) (nsaph.dbt.dbt_config.DBTConfig parameter) (nsaph.loader.common.CommonConfig parameter), [1] (nsaph.loader.common.DBConnectionConfig parameter), [1] (nsaph.loader.common.DBTableConfig parameter), [1] (nsaph.loader.index_builder.IndexerConfig parameter) (nsaph.loader.loader_config.LoaderConfig parameter), [1] (nsaph.loader.monitor.DBMonitorConfig parameter) (nsaph_utils.utils.context.Context parameter), [1], [2], [3] (tests.test_cli_context.MadeUpContext parameter)

destination (AirNowContext attribute) (AQSContext attribute) (epa.aqs_tools.collect_annual_downloads parameter) (epa.aqs_tools.collect_aqs_download_tasks parameter) (epa.aqs_tools.collect_daily_downloads parameter) (epa.aqs_tools.destination_path parameter) (GridContext attribute) (gridmet.task.DownloadGridmetTask parameter), [1] destination_file_name() (GridmetTask class method), [1] destination_path() (in module epa.aqs_tools) df (nsaph_gis.annotator.GISAnnotator.join parameter) (nsaph_utils.qc.tester.Test.check parameter) diff() (in module nsaph.loader) disaggregate() (in module gridmet.gridmet_tools), [1] do_query() (VariableDef method), [1] doc (epa.airnow_ds_def.AirNowContext parameter) (epa.aqs_ds_def.AQSContext parameter) (gridmet.config.GridContext parameter) (gridmet.config.GridMETContext parameter) Domain (class in nsaph.data_model.domain) domain (CommonConfig attribute), [1] DomainOperations (class in nsaph.operations.domain_operations) download() (AirNowDownloader method) (AQS method) (in module nsaph_utils.utils.io_utils), [1] download_county() (GISDownloader class method) download_data() (in module epa.aqs_tools) download_geometry() (in module census.tigerweb), [1] download_range() (AirNowDownloader method) download_shapes() (GISDownloader class method) (in module epa.airnow_shapes) download_zcta() (GISDownloader class method) DownloadGridmetTask (class in gridmet.task), [1] downloads (epa.aqs_tools.collect_annual_downloads parameter) (epa.aqs_tools.collect_daily_downloads parameter) DownloadTask (class in nsaph_utils.utils.io_utils) downscale (RasterizationStrategy attribute), [1] downscale() (Aggregator method) drilldown() (Inserter static method) drop (DataLoaderAction attribute) drop() (DataLoader method) (Domain method) (DomainOperations class method) (IndexBuilder method) (Table method) drop_all() (IndexBuilder class method) dryrun (DBConnectionConfig attribute), [1] dtype() (in module nsaph.requests.hdf5_export) dump() (in module nsaph.util.pg_json_dump) dump_csv() (AirNowDownloader static method) DuplicatesExplorer (class in cms.duplicates)

E

empty_line() (CWLGenerator method) encode() (in module nsaph.util.cwl_collect_outputs) end (FWFColumn attribute) end_date (AirNowContext attribute) (epa.airnow_downloader.AirNowDownloader.download_range parameter) end_invisible_row() (in module nsaph.dictionary.element) end_table() (in module nsaph.dictionary.element) ensure() (in module nsaph.util.pg_json_dump) entry (nsaph.data_model.utils.entry_to_path parameter) entry_to_path() (in module nsaph.data_model.utils) enum() (AirNowContext class method) (AQSContext class method) (Context class method), [1], [2], [3] epa.airnow module epa.airnow_downloader module epa.airnow_ds_def module epa.airnow_setup module epa.airnow_shapes module epa.aqs module epa.aqs_ds_def module epa.aqs_expand module epa.aqs_tools module epa.registry module EPAConfig (class in epa.registry) erc (GridmetVariable attribute), [1] error (Severity attribute) estimate_optimal_downscaling_factor() (in module gridmet.gridmet_tools) etr (GridmetVariable attribute), [1] execute() (Aggregator method) (ComputeGridmetTask method), [1] (ComputePointsTask method), [1] (DBActivityMonitor static method) (DownloadGridmetTask method), [1] (GridmetTask method), [1] (in module nsaph.util.init_core_db) (in module nsaph.util.psql) (IndexBuilder method) (MedicareCombinedView method) (NetCDFFile method) (Query method)

execute_sequentially() (Gridmet method) execute_sql() (DataLoader static method) (MedicareCombinedView method) execute_with_monitor() (LoaderBase method) expand_data() (in module epa.aqs_expand) expand_macro1() (Column class method) expand_macro2() (Column method) ExpectationError ExpectedData (class in cms.aggregates) explore_all() (DuplicatesExplorer method) explore_one() (DuplicatesExplorer method) export() (in module nsaph.requests.hdf5_export) (in module nsaph.util.pg_json_dump) (MedicareFile method) (PgPqBase method) (PgPqPartitionedQuery method) (PgPqSingleQuery method) export_schema() (PgPqBase class method) export_sql() (PgPqBase class method) export_table() (PgPqBase class method) extension (nsaph_utils.utils.io_utils.as_stream parameter), [1] (nsaph_utils.utils.io_utils.file_as_stream parameter), [1] extra_columns (GridContext attribute) (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) extract_generation_code() (Domain method) extract_value() (CustomColumn method)

F

factor (gridmet.gridmet_tools.disaggregate parameter), [1] (gridmet.gridmet_tools.get_affine_transform parameter), [1] fetch_from_docker_file() (CWLAppRunnerGenerator method) fetch_metadata() (CWLAppRunnerGenerator method) file_as_csv_reader() (in module nsaph_utils.utils.io_utils), [1] file_as_stream() (in module nsaph_utils.utils.io_utils), [1] file_name (cms.fts2yaml.mcr_type parameter) file_type (census.assemble_data.DataPlan.write_data parameter), [1] filename (census.assemble_data.DataPlan.write_schema parameter), [1] (nsaph_utils.utils.io_utils.file_as_csv_reader parameter), [1] (nsaph_utils.utils.io_utils.file_as_stream parameter), [1] files (nsaph.loader.diff parameter) (Parallelization attribute) filter (nsaph_utils.utils.io_utils.write_csv parameter), [1] find() (Domain method) (MedparConverter class method) (NCViewer method) find_all_names() (Column method) find_column2arr() (MedicareCombinedView class method) find_dependent() (Domain method) find_duplicate_dates() (DuplicatesExplorer method) find_file_in_path() (LoaderBase class method) find_fts_tuples() (in module cms.tools.mcr_create_test_data) find_mapped_column_name() (Domain method) find_name() (in module nsaph.loader.index_builder) (in module nsaph.loader.vacuum)

find_shape_file() (GridmetTask class method), [1] (in module gridmet.gridmet_tools), [1] find_tables() (in module nsaph.requests.query) find_tool() (CWLGenerator static method) flt (epa.aqs_tools.transfer parameter) flush() (Collector method), [1] (CSVWriter method), [1] (in module nsaph.util.pg_json_dump) fm100 (GridmetVariable attribute), [1] fm1000 (GridmetVariable attribute), [1] fopen() (in module nsaph_utils.utils.io_utils), [1] (Introspector method) (Table method) force_standard_api (ComputePointsTask attribute) fqn() (Domain method) (in module nsaph.dictionary.element) (in module nsaph.requests.query) (in module nsaph.util.pg_json_dump) FSTReader (class in nsaph_utils.utils.pyfst) fts_path() (FTSTuple method) FTSColumn (class in cms.fts2yaml) FTSParseException FTSTuple (class in cms.tools.mcr_create_test_data) FWFColumn (class in nsaph_utils.utils.fwf) FWFMeta (class in nsaph_utils.utils.fwf) FWFReader (class in nsaph_utils.utils.fwf)

G

gen_random_dimensions() (NCViewer method) generate() (CWLTestGenerator method) (in module nsaph.requests.query) generate_app_step() (CWLAppRunnerGenerator method) generate_area() (NCViewer method) generate_from() (in module nsaph.requests.query) generate_ingest_step() (CWLAppRunnerGenerator method) generate_ingest_steps() (CWLAppRunnerGenerator method) generate_insert_from_select() (Domain method) generate_order_by() (in module nsaph.requests.query) generate_pipeline() (CWLAppRunnerGenerator method) generate_registry() (CWLAppRunnerGenerator method) generate_select() (in module nsaph.requests.query) generate_sql() (MedicareCombinedView method) generate_tests() (TableFingerprint method) generate_where() (in module nsaph.requests.query) generate_workflow() (CWLAppRunnerGenerator method) genz (CensusShapeCollection attribute) geo (census.query.api_geography parameter), [1] geography (census.query.get_census_data parameter), [1] Geography (class in nsaph_gis.constants), [1] geography (GridContext attribute) (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.task.ComputeShapesTask parameter), [1] (nsaph_gis.compute_shape.StatsCounter.process parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers_return_dict parameter) geography_type (gridmet.gridmet_tools.find_shape_file parameter), [1] geometry (census.assemble_data.DataPlan parameter), [1] (census.assemble_data.VariableDef.calculate_var parameter), [1] (census.assemble_data.VariableDef.do_query parameter), [1] (census.tigerweb.download_geometry parameter), [1] (census.tigerweb.get_area parameter), [1] GeoTiffAggregator (class in gridmet.aggregator) get() (Domain method) get_action() (Argument method) get_activity() (DBActivityMonitor method) get_address() (in module gridmet.gridmet_tools) get_affine_transform() (in module gridmet.gridmet_tools), [1] get_aggregation() (Table method) get_aggregation_year() (NetCDFFile method) (WUSTLFile method) get_anchor() (NCViewer method) get_area() (in module census.tigerweb), [1] get_atmos_url() (in module gridmet.gridmet_tools), [1] get_autocommit() (Inserter method) get_aws_secret() (Connection class method) get_blocks() (DBActivityMonitor method) get_categories() (TableFingerprint method) get_census_data() (in module census.query), [1] get_column() (MedicareCombinedView class method) get_column_links() (Table method) get_column_type() (Domain static method) get_columns() (Domain class method) (Introspector method) (MedicareCombinedView method) (QueryBuilder method) (TableFingerprint method) get_columns_as_dict() (Domain class method) get_connection() (DataLoader method) get_connections() (DataLoader method) get_cumulative_timing() (Inserter method) get_database_types() (Connection method) get_dataset_variables() (Aggregator method) (GeoTiffAggregator method) (NetCDFAggregator method) get_days() (ComputeGridmetTask method) (in module gridmet.gridmet_tools), [1] get_description() (FTSColumn method) (MedicareFTSColumn method) get_domain() (LoaderBase class method) get_domain_name() (CWLAppRunnerGenerator method) (NetCDFFile method) get_endpoint() (in module census.census_info), [1] get_entries() (in module nsaph_utils.utils.io_utils), [1] get_files() (DataLoader method) (MedicareDataLoader method) get_geospatial_size() (NCViewer method) get_header() (Aggregator method) get_header_level() (in module nsaph_utils.docutils.copy_section) get_help() (Argument method)

get_hostname_as_localhost() (in module nsaph.util.net) get_index_ddl() (Domain method) (Table method) get_indexing_progress() (DBActivityMonitor method) get_indices() (in module nsaph_utils.interpolation.interpolate_ma) get_instance() (DBActivityMonitor class method) get_key() (ComputeGridmetTask method) (ComputePointsTask method) (ComputeShapesTask method) get_key_for_geography() (StatsCounter class method) get_layer() (Aggregator method) (GeoTiffAggregator method) (NetCDFAggregator method) get_metadata() (PgPqBase method) get_multi_column_index_ddl() (Domain method) get_nargs() (Argument method) get_nkn_url() (in module gridmet.gridmet_tools), [1] get_optimal_downscaling_factor() (NCViewer method) get_output_files() (CWLAppRunnerGenerator method) get_output_tables() (CWLAppRunnerGenerator method) get_path() (DataReader method) get_pid() (Connection static method) (LoaderBase method) get_predecessors() (Table method) get_predecessors_for_column() (Table method) get_readme() (in module nsaph_utils.utils.io_utils), [1] get_registry() (Aggregator method) (NetCDFFile method) (WUSTLFile method) get_registry_file_name() (CWLAppRunnerGenerator method) get_resource_dir() (in module nsaph.util.resources) get_resources() (in module nsaph.util.resources) get_result() (ListCollector method), [1] get_select_from() (Domain class method) get_simple_column() (MedicareCombinedView class method) get_source_columns() (Table method) get_sql_dir() (in module nsaph.util.init_core_db) get_table_name() (NetCDFFile method) (WUSTLFile method) get_tables() (MedicareCombinedView method) (QueryBuilder class method) get_thread_timing() (Inserter method) get_timestamp() (Inserter method) get_timings() (Inserter method) get_url() (DownloadGridmetTask class method), [1] get_value() (NCViewer method) get_var_names() (DataPlan method), [1] get_variable() (ComputeGridmetTask class method) (in module gridmet.gridmet_tools), [1] get_varlist() (in module census.census_info), [1] get_vars() (VariableDef method), [1] get_work_dir() (CWLGenerator method) GISAnnotator (class in nsaph_gis.annotator) GISDownloader (class in nsaph_gis.downloader) good_lines (FWFReader attribute) Graph (class in nsaph.dictionary.element) greater_than (Condition attribute) GridContext (class in gridmet.config) Gridmet (class in gridmet.launcher) gridmet.aggregator module gridmet.config module gridmet.gridmet_tools module, [1] gridmet.launcher module gridmet.netCDF_file_processor module gridmet.netCDF_tools module gridmet.prof module gridmet.registry module gridmet.task module GridMETContext (class in gridmet.config) GridmetTask (class in gridmet.task), [1] GridmetVariable (class in gridmet.config), [1] guess_str() (Introspector method) guess_types() (Introspector method) (Table method)

H

handle() (MedicareLoader method) (MedicareSAS method) (SASIntrospector method) (SASLoader method) handle_csv() (Introspector method) handle_empty() (MedicareLoader method) handle_json() (Introspector method) handle_sas() (Introspector method) handle_sas_file() (MedicareSAS method) has() (Domain method)

has_been_ingested() (DataLoader method) has_column_spec() (Domain static method) has_hard_linked_children() (Domain method) header (epa.aqs_tools.transfer parameter) help (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] host_name() (Connection static method) hr() (in module nsaph.dictionary.element) hstr() (in module nsaph.dictionary.element) html() (Column method) (Table method)

I

i (cms.fts2yaml.FTSColumn.conv parameter) (cms.fts2yaml.MedicareFTSColumn.conv parameter) (nsaph_utils.interpolation.interpolate_ma.calc_weights parameter) import_data_from_file() (DataLoader method) import_file() (Inserter method) import_table() (in module nsaph.util.pg_json_dump) include (nsaph.data_model.model.Table.make_iso_column parameter) IncompatibleArgumentsError InconsistentTypes incremental (LoaderConfig attribute), [1] index (nsaph_utils.interpolation.interpolate_ma.get_indices parameter) index_method() (in module nsaph.data_model.model) index_of() (in module nsaph.util.pg_export_parquet) IndexBuilder (class in nsaph.loader.index_builder) IndexerConfig (class in nsaph.loader.index_builder) indices (nsaph_utils.interpolation.interpolate_ma.calc_weights parameter) infile (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.task.ComputeGridmetTask parameter), [1] (gridmet.task.ComputePointsTask parameter), [1] (gridmet.task.ComputeShapesTask parameter), [1] info (Severity attribute) info() (in module nsaph.util.sas_explorer) (MedicareFile method) init() (Domain method) (DuplicatesExplorer method) (MedicaidFTS method) (MedicareFile method) (MedicareFTS method) (Registry method) init_cms() (in module cms.init_cms_db) (in module cms.table_population) init_core() (in module nsaph.util.init_core_db) init_logging() (in module nsaph) init_registry() (MedicareRegistry method) initialize_logging() (in module census.calculate_density) (in module census.do_qc) (in module census.interpolate_data) (in module census.write_data)

input (CMSSchema attribute) Inputs (class in nsaph.apprunner.app_run_generator) insert (DataLoaderAction attribute) insert_from_select() (DataLoader method) insert_section() (in module nsaph_utils.docutils.copy_section) Inserter (class in nsaph.data_model.inserter) install() (in module nsaph.util.shapes) instantiate() (Context method) integral (CType attribute) interpolate() (DataPlan method), [1] (in module nsaph_utils.interpolation.interface) interpolate_ma() (in module nsaph_utils.interpolation.interpolate_ma) interpolate_vars (nsaph_utils.interpolation.interface.interpolate parameter) InterpolationTest (class in tests.test_interpolation) introspect() (Introspector method) (ProjectLoader method) Introspector (class in nsaph.loader.introspector) ip (MedicareCombinedView attribute) is_array() (Domain static method) is_column_wildcard() (Domain class method) is_dir() (in module nsaph_utils.utils.io_utils), [1] is_downloaded() (AQS method) (in module nsaph_utils.utils.io_utils), [1] is_downstream() (Table method) is_generated() (Domain static method) is_loaded() (DuplicatesExplorer method) is_masked() (PointInRaster method) is_missing() (SpecialValues class method) is_parallel() (DataLoader method) is_readme() (in module nsaph_utils.utils.io_utils), [1] is_relative_to() (in module nsaph.loader.project_loader) is_required() (Argument method) is_transformed() (Column method) is_untyped() (SpecialValues class method) is_up_to_date() (DownloadTask method) is_yaml_or_json() (in module nsaph_utils.utils.io_utils)

J

Join (class in nsaph.dictionary.tables)

join() (GISAnnotator method)

K

k (nsaph_utils.interpolation.interpolate_ma.get_indices parameter) (nsaph_utils.interpolation.interpolate_ma.interpolate_ma parameter)

key (census.census_info.set_api_key parameter), [1] (census.query.get_census_data parameter), [1]

L

label() (Relation method) layer (gridmet.gridmet_tools.disaggregate parameter), [1] (gridmet.task.ComputeGridmetTask.compute_one_day parameter), [1] (gridmet.task.ComputePointsTask.compute_one_day parameter), [1] (gridmet.task.ComputeShapesTask.compute_one_day parameter), [1] (nsaph_gis.compute_shape.StatsCounter.prepare_stats parameter) (nsaph_gis.compute_shape.StatsCounter.process parameter) layers (nsaph_gis.compute_shape.StatsCounter.process_layers parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers_return_dict parameter) length (FWFColumn attribute) less_than (Condition attribute) level (nsaph.init_logging parameter) limit (LoaderConfig attribute), [1] lines (Parallelization attribute) link_to_column() (Table static method) link_to_table() (Table static method) list() (MedparConverter method) list_columns() (Domain method) list_identifiers() (Domain static method) list_source_columns() (Domain method) ListCollector (class in gridmet.task) (class in nsaph_utils.utils.io_utils), [1] ln (cms.tools.mcr_file.MedicareFile.read_record parameter) load (DataLoaderAction attribute)

load() (DataLoader method) (DuplicatesExplorer method) load_county_codes() (in module census.data.load_data), [1] load_csv() (Introspector method) load_data() (in module nsaph.util.init_core_db) load_fst() (Introspector method) load_json() (Introspector method) load_range() (in module nsaph.data_model.model) (Introspector static method) load_sas() (Introspector method) load_state_codes() (in module census.data.load_data), [1] load_yaml() (Tester method) loader_for_csv() (MedicareLoader static method) loader_for_fwf() (MedicareLoader static method) LoaderBase (class in nsaph.loader) LoaderConfig (class in nsaph.loader.loader_config), [1] Lock (class in nsaph.loader.monitor) log (LoaderConfig attribute), [1] log() (in module cms.tools.mcr_file) (ProfilingData method) log_activity() (DBActivityMonitor method) log_perf() (Gridmet method) log_progress() (Inserter method) (Table static method)

M

ma_num (nsaph_utils.interpolation.interface.interpolate parameter) MadeUpContext (class in tests.test_cli_context) main() (in module gridmet.launcher) (in module nsaph_utils.docutils.collector) (in module nsaph_utils.docutils.copy_section) (in module nsaph_utils.docutils.cwl2md) make_column() (Table method) make_fips_column() (Table method) make_int_column() (Table method) make_iso_column() (Table method) make_point() (ComputePointsTask method) map2ds() (in module nsaph.requests.hdf5_export) map_selected_columns() (Domain method) map_var() (NCViewer method) matches() (Domain method) (GISAnnotator static method) (SASIntrospector class method) max_mem_used (StatsCounter attribute) MAX_TEMP (Parameter attribute) max_year (census.assemble_data.DataPlan.interpolate parameter), [1] (census.census_info.census_years parameter), [1] mcr_type() (in module cms.fts2yaml) MDCreator (class in nsaph_utils.docutils.md_creator) medicaid_indices (MedicaidFTS attribute) MedicaidFTS (class in cms.fts2yaml) MedicaidFTSColumn (class in cms.fts2yaml) MedicareCombinedView (class in cms.tools.mcr_combine_tables) MedicareDataLoader (class in cms.mcr_data_loader) MedicareFile (class in cms.tools.mcr_file) MedicareFTS (class in cms.fts2yaml) MedicareFTSColumn (class in cms.fts2yaml) MedicareLoader (class in cms.tools.mcr_fts2db) MedicareRegistry (class in cms.tools.mcr_registry) MedicareSAS (class in cms.tools.mcr_sas) MedparConverter (class in cms.tools.medpar_converter) MedParFileSet (class in cms.tools.medpar_converter) MedparParseException mem() (in module nsaph_utils.utils.profile_utils) merge_years (AQSContext attribute) (epa.aqs_tools.collect_aqs_download_tasks parameter) meta (nsaph_utils.utils.fwf.FWFReader parameter) metadata (GridContext attribute) (gridmet.task.ComputePointsTask parameter), [1] metadata_sql() (PgPqBase method) method (census.assemble_data.DataPlan.interpolate parameter), [1] (nsaph_utils.interpolation.interface.interpolate parameter) MIN_TEMP (Parameter attribute) min_year (census.assemble_data.DataPlan.interpolate parameter), [1] (census.census_info.census_years parameter), [1] mode (gridmet.aggregator.Aggregator.execute parameter) (gridmet.task.ComputeGridmetTask.execute parameter), [1] (gridmet.task.ComputePointsTask.execute parameter), [1] (nsaph_utils.utils.io_utils.as_content parameter), [1] (nsaph_utils.utils.io_utils.as_stream parameter), [1] (nsaph_utils.utils.io_utils.file_as_stream parameter), [1] (nsaph_utils.utils.io_utils.fopen parameter), [1] module census.assemble_data, [1] census.calculate_density census.census_info, [1] census.cli, [1] census.data.load_data, [1] census.do_qc census.exceptions, [1] census.interpolate_data census.query, [1] census.tigerweb, [1] census.utils, [1] census.write_data cms.aggregates cms.create_schema_config cms.duplicates cms.init_cms_db cms.mcr_data_loader cms.random_selector cms.registry cms.table_population cms.tools.mcr_combine_tables cms.tools.mcr_create_test_data cms.tools.mcr_file cms.tools.mcr_fts2csv cms.tools.mcr_fts2db cms.tools.mcr_registry cms.tools.mcr_sas cms.tools.mcr_sas2db cms.tools.mcr_sas2yaml cms.tools.medpar_converter epa.airnow epa.airnow_downloader epa.airnow_ds_def epa.airnow_setup epa.airnow_shapes epa.aqs epa.aqs_ds_def epa.aqs_expand epa.aqs_tools epa.registry gridmet.aggregator gridmet.config gridmet.gridmet_tools, [1] gridmet.launcher gridmet.netCDF_file_processor gridmet.netCDF_tools gridmet.prof gridmet.registry gridmet.task nsaph nsaph.adi nsaph.apprunner.app_run_generator nsaph.create nsaph.data_model.domain nsaph.data_model.inserter nsaph.data_model.model nsaph.data_model.utils nsaph.db nsaph.dbt.create_test nsaph.dbt.dbt_config nsaph.dbt.dbt_runner nsaph.dbt.gen_dbt_cwl nsaph.dictionary.columns nsaph.dictionary.element nsaph.dictionary.tables nsaph.fips nsaph.link_gis nsaph.loader nsaph.loader.common, [1] nsaph.loader.data_loader nsaph.loader.index_builder nsaph.loader.introspector nsaph.loader.loader_config, [1] nsaph.loader.monitor nsaph.loader.project_loader nsaph.loader.vacuum nsaph.operations.domain_operations nsaph.pg_keywords nsaph.requests.hdf5_export nsaph.requests.query nsaph.util.cwl_collect_outputs nsaph.util.cwl_generator nsaph.util.executors nsaph.util.init_core_db nsaph.util.net nsaph.util.pg_export_parquet nsaph.util.pg_json_dump nsaph.util.psql nsaph.util.query_builder nsaph.util.resources nsaph.util.sas_explorer nsaph.util.shapes nsaph_gis.annotator nsaph_gis.compute_shape nsaph_gis.constants nsaph_gis.downloader nsaph_gis.geometry nsaph_utils.DataSet nsaph_utils.docutils.collector nsaph_utils.docutils.copy_section nsaph_utils.docutils.cwl2md nsaph_utils.docutils.md_creator nsaph_utils.interpolation.interface nsaph_utils.interpolation.interpolate_ma nsaph_utils.qc.tester nsaph_utils.utils.context nsaph_utils.utils.fwf nsaph_utils.utils.io_utils, [1] nsaph_utils.utils.profile_utils nsaph_utils.utils.pyfst pollution.wustl_file_processor tests.test_cli_context tests.test_interpolation tests.test_qc

ModuleCollector (class in nsaph_utils.docutils.collector) multiple (Cardinality attribute) MultiRecord (class in nsaph_gis.compute_shape) MyTestCase (class in tests.test_cli_context)

N

NA (SpecialValues attribute) name (FWFColumn attribute) (nsaph.init_logging parameter) (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] (nsaph_utils.utils.io_utils.is_readme parameter), [1] name() (Introspector static method) name2path() (in module nsaph.util.resources) NaN (SpecialValues attribute) nattrs (MedicaidFTSColumn attribute) (MedicareFTSColumn attribute) nc_file (gridmet.gridmet_tools.get_affine_transform parameter), [1] ncol (FWFMeta attribute) NCViewer (class in gridmet.netCDF_tools) need_index() (Domain method) NetCDFAggregator (class in gridmet.aggregator) NetCDFFile (class in gridmet.netCDF_file_processor) new() (DataLoaderAction class method) new_domain() (ProjectLoader class method) next() (FWFReader method) NO2 (Parameter attribute), [1] no_data (nsaph_gis.compute_shape.StatsCounter.prepare_stats parameter) (nsaph_gis.compute_shape.StatsCounter.process parameter) no_missing (Condition attribute) node (nsaph.data_model.utils.split parameter) none (Parallelization attribute) noop() (in module nsaph.dictionary.columns) normalize_value() (PgPqSingleQuery static method) nrows (FWFMeta attribute) nsaph module nsaph.adi module nsaph.apprunner.app_run_generator module nsaph.create module nsaph.data_model.domain module nsaph.data_model.inserter module nsaph.data_model.model module nsaph.data_model.utils module nsaph.db module nsaph.dbt.create_test module nsaph.dbt.dbt_config module nsaph.dbt.dbt_runner module nsaph.dbt.gen_dbt_cwl module nsaph.dictionary.columns module nsaph.dictionary.element module nsaph.dictionary.tables module nsaph.fips module nsaph.link_gis module nsaph.loader module nsaph.loader.common module, [1] nsaph.loader.data_loader module nsaph.loader.index_builder module nsaph.loader.introspector module nsaph.loader.loader_config module, [1]

nsaph.loader.monitor module nsaph.loader.project_loader module nsaph.loader.vacuum module nsaph.operations.domain_operations module nsaph.pg_keywords module nsaph.requests.hdf5_export module nsaph.requests.query module nsaph.util.cwl_collect_outputs module nsaph.util.cwl_generator module nsaph.util.executors module nsaph.util.init_core_db module nsaph.util.net module nsaph.util.pg_export_parquet module nsaph.util.pg_json_dump module nsaph.util.psql module nsaph.util.query_builder module nsaph.util.resources module nsaph.util.sas_explorer module nsaph.util.shapes module nsaph_gis.annotator module nsaph_gis.compute_shape module nsaph_gis.constants module nsaph_gis.downloader module nsaph_gis.geometry module nsaph_utils.DataSet module nsaph_utils.docutils.collector module nsaph_utils.docutils.copy_section module nsaph_utils.docutils.cwl2md module nsaph_utils.docutils.md_creator module nsaph_utils.interpolation.interface module nsaph_utils.interpolation.interpolate_ma module nsaph_utils.qc.tester module nsaph_utils.utils.context module nsaph_utils.utils.fwf module nsaph_utils.utils.io_utils module, [1] nsaph_utils.utils.profile_utils module nsaph_utils.utils.pyfst module num_vec (nsaph_utils.interpolation.interpolate_ma.interpolate_ma parameter) numeric (CType attribute)

O

on_after_read_file() (MedicaidFTS method) (MedicareFTS method) on_parse_exception() (FWFReader method) on_prepare() (ComputeGridmetTask method) (ComputePointsTask method) (ComputeShapesTask method) (NetCDFFile method) (WUSTLFile method) on_set_strategy() (Aggregator method) (GeoTiffAggregator method) (NetCDFAggregator method) open() (Aggregator method) (CSVLikeJsonReader method) (FWFReader method) (GeoTiffAggregator method) (MedicareDataLoader class method) (NetCDFAggregator method) open_csv() (DataReader method)

open_fst() (DataReader method) open_fwf() (DataReader method) open_json() (DataReader method) open_sas7bdat() (DataReader method) ord (FWFColumn attribute) origin (ComputeGridmetTask attribute) out_dir (census.tigerweb.download_geometry parameter), [1] outfile (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.task.ComputeGridmetTask parameter), [1] (gridmet.task.ComputePointsTask parameter), [1] (gridmet.task.ComputeShapesTask parameter), [1] output (CMSSchema attribute) (EPAConfig attribute) (GridContext attribute) OutputType (class in gridmet.config) OZONE (Parameter attribute), [1]

P

page (LoaderConfig attribute), [1] Parallel (class in gridmet.task) Parallelization (class in nsaph.loader.loader_config), [1] parallelization (LoaderConfig attribute), [1] Parameter (class in epa.airnow_ds_def) (class in epa.aqs_ds_def) parameter (epa.airnow_downloader.AirNowDownloader parameter) parameters (AirNowContext attribute) (AQSContext attribute) (epa.aqs_tools.collect_annual_downloads parameter) (epa.aqs_tools.collect_aqs_download_tasks parameter) (epa.aqs_tools.collect_daily_downloads parameter) (epa.aqs_tools.download_data parameter) params (nsaph_utils.utils.io_utils.as_content parameter), [1] (nsaph_utils.utils.io_utils.as_stream parameter), [1] parse() (CWLParser method) parse_args() (in module nsaph.util.cwl_collect_outputs) (in module nsaph.util.init_core_db) (in module nsaph.util.psql) parse_expr() (Column method) parse_file_name() (WUSTLFile method) parse_fips12() (Table method) parse_wildcard_column_spec() (Domain class method) PARTIALLY_MASKED (PointInRaster attribute) path (census.assemble_data.DataPlan.write_data parameter), [1] (epa.aqs_tools.collect_annual_downloads parameter) (epa.aqs_tools.destination_path parameter) (FWFMeta attribute) (nsaph_utils.utils.io_utils.basename parameter), [1] (nsaph_utils.utils.io_utils.fopen parameter), [1] (nsaph_utils.utils.io_utils.get_entries parameter), [1] (nsaph_utils.utils.io_utils.get_readme parameter), [1] (nsaph_utils.utils.io_utils.is_dir parameter), [1] path_to_user_request (nsaph.requests.hdf5_export.export parameter) pattern (LoaderConfig attribute), [1] pet (GridmetVariable attribute), [1] PgPqBase (class in nsaph.util.pg_export_parquet) PgPqPartitionedQuery (class in nsaph.util.pg_export_parquet) PgPqSingleQuery (class in nsaph.util.pg_export_parquet) pid (DBMonitorConfig attribute) pid() (Connection method) PM10 (Parameter attribute) PM25 (Parameter attribute), [1] point (Shape attribute), [1]

PointInRaster (class in nsaph_gis.geometry) points (GridContext attribute) (Parallel attribute) points_file (gridmet.task.ComputePointsTask parameter), [1] pollution.wustl_file_processor module polygon (Shape attribute), [1] populate() (in module nsaph.util.pg_json_dump) PopulateConfig (class in cms.table_population) pos (cms.fts2yaml.FTSColumn.to_fwf_column parameter) pr (GridmetVariable attribute), [1] prepare() (Aggregator method) (ComputeGridmetTask method) (Inserter method) (NetCDFFile method) (Query method) prepare_stats() (StatsCounter class method) print (DataLoaderAction attribute) print() (Graph method) (NCViewer method) print_by_geography() (NCViewer method) print_ddl() (DataLoader method) print_geo_var() (NCViewer method) print_group() (Graph method) print_metadata() (NCViewer method) print_random_values() (NCViewer method) print_sql() (MedicareCombinedView method) print_stat() (IndexBuilder method) print_table_ddl() (DataLoader method) print_var() (NCViewer method) process() (AirNowDownloader method) (MedicareLoader class method) (SASIntrospector class method) (SASLoader class method) (StatsCounter class method) process_layers() (StatsCounter class method) process_layers_return_dict() (StatsCounter class method) ProfilingData (class in gridmet.prof) ProjectLoader (class in nsaph.loader.project_loader) prop (MultiRecord attribute) (Record attribute) proxy (AirNowContext attribute) ps (MedicareCombinedView attribute) pums push() (Inserter method)

Q

qc (AirNowContext attribute) QCTests (class in tests.test_qc) qmem() (in module nsaph_utils.utils.profile_utils) qqmem() (in module nsaph_utils.utils.profile_utils) qstr() (in module nsaph.dictionary.element) qualify_column() (PgPqPartitionedQuery static method)

quality_check() (DataPlan method), [1] QUERY (Aggregator attribute) Query (class in nsaph.requests.query) query() (QueryBuilder method) QueryBuilder (class in nsaph.util.query_builder) quote() (in module gridmet.task) (in module nsaph.util.pg_json_dump)

R

r (nsaph_utils.utils.io_utils.check_http_response parameter), [1] ram (GridContext attribute) (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.task.ComputeGridmetTask parameter), [1] (gridmet.task.ComputePointsTask parameter), [1] (gridmet.task.ComputeShapesTask parameter), [1] random_lat_lon() (NCViewer method) raster (nsaph_gis.geometry.PointInRaster.bilinear parameter) RasterizationStrategy (class in nsaph_gis.constants), [1] raw_downloads (GridContext attribute) read() (ColumnDef method) (ColumnReader method) read_batch() (Inserter method) read_config() (Connection class method) read_record() (FWFReader method) (MedicareFile method) read_registry() (MedicareRegistry method) read_section() (in module nsaph_utils.docutils.copy_section) reader (epa.aqs_tools.transfer parameter) (nsaph_utils.utils.io_utils.write_csv parameter), [1] reconcile() (Introspector static method) Record (class in nsaph_gis.compute_shape) record (cms.tools.mcr_file.MedicareFile.validate parameter) reduce_tables() (in module nsaph.requests.query) regex() (in module nsaph.data_model.utils) Registry (class in cms.registry) (class in epa.registry) (class in gridmet.registry) registry (CommonConfig attribute), [1] (Inputs attribute)

Relation (class in nsaph.dictionary.tables) remove_ext() (in module nsaph.loader.project_loader) report() (DuplicatesExplorer method) report_row() (DBTRunner class method) requested_date (epa.airnow_downloader.AirNowDownloader.download parameter) reset (AirNowContext attribute) (CMSSchema attribute) (LoaderConfig attribute), [1] reset() (DataLoader method) (DBTRunner method) (DownloadTask method) reset_timer() (Inserter method) resolve_host() (Connection class method) result_set() (in module nsaph.util.pg_export_parquet) (in module nsaph.util.pg_json_dump) ResultSetDeprecated (class in nsaph.db) ret_dict (nsaph_utils.utils.fwf.FWFReader parameter) rlen (FWFMeta attribute) rmax (GridmetVariable attribute), [1] rmin (GridmetVariable attribute), [1] rollback() (DataLoader method) row (epa.aqs_tools.add_monitor_key parameter) rows() (DataReader method) run() (DataLoader method) (DBActivityMonitor method) (DBTRunner method) (in module cms.duplicates) (IndexBuilder method) (PgPqBase class method) (ProjectLoader method) (Vacuum method) run_script() (DBTRunner method)

S

s (cms.fts2yaml.width parameter) (epa.airnow_ds_def.AirNowContext.enum parameter) (epa.aqs_ds_def.AQSContext.enum parameter) (nsaph_utils.utils.context.Context.enum parameter), [1], [2], [3] sas2db_type() (Introspector class method) SASIntrospector (class in cms.tools.mcr_sas2yaml) SASLoader (class in cms.tools.mcr_sas2db) save() (DuplicatesExplorer method) (MDCreator method) (MedicareRegistry method) (Table method) save_registry() (ProjectLoader method) script (DBTConfig attribute) select() (in module cms.random_selector) (in module cms.tools.mcr_create_test_data) set_api_key() (in module census.census_info), [1] set_args() (NCViewer method) set_empty_args() (Context method) set_partition_values() (PgPqPartitionedQuery method) set_partitioning() (PgPqBase method) (PgPqPartitionedQuery method) (PgPqSingleQuery method) set_sloppy() (Domain method) set_strategy() (Aggregator method) set_table() (DataLoader method) setup() (in module epa.airnow_setup) setup_schema() (PgPqBase method) Severity (class in nsaph_utils.qc.tester) sf1 sf3 Shape (class in gridmet.config), [1] shape (gridmet.task.GridmetTask.find_shape_file parameter), [1] shape_files (nsaph_gis.annotator.GISAnnotator parameter) shape_type (gridmet.gridmet_tools.find_shape_file parameter), [1] shapefile (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.task.ComputeShapesTask parameter), [1] shapes (AirNowContext attribute) (GridContext attribute) shapes_dir (GridContext attribute) (gridmet.gridmet_tools.find_shape_file parameter), [1] show() (in module nsaph.util.pg_json_dump) show_api_keys() (in module census.utils), [1] shpfile (nsaph_gis.compute_shape.StatsCounter.prepare_stats parameter) (nsaph_gis.compute_shape.StatsCounter.process parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers_return_dict parameter) simulate() (in module nsaph.util.sas_explorer) single (Cardinality attribute) size (FWFMeta attribute) SIZE (ResultSetDeprecated attribute) sizeof_fmt() (in module nsaph_utils.utils.io_utils) skip() (Domain method) sloppy (LoaderConfig attribute), [1] SO2 (Parameter attribute) SpecialValues (class in nsaph_utils.utils.io_utils) sph (GridmetVariable attribute), [1]

spillover_table() (Domain method) split() (in module nsaph.data_model.utils) (QueryBuilder static method) sq_mi (census.assemble_data.DataPlan.calculate_densities parameter), [1] (census.tigerweb.get_area parameter), [1] sql (Query attribute) srad (GridmetVariable attribute), [1] stamp_time() (Inserter method) start (FWFColumn attribute) start_date (AirNowContext attribute) (epa.airnow_downloader.AirNowDownloader.download_range parameter) start_invisible_row() (in module nsaph.dictionary.element) start_outputs() (CWLGenerator method) start_steps() (CWLGenerator method) start_table() (in module nsaph.dictionary.element) state (census.assemble_data.DataPlan parameter), [1] (census.assemble_data.VariableDef.calculate_var parameter), [1] (census.assemble_data.VariableDef.do_query parameter), [1] (census.query.get_census_data parameter), [1] (DBMonitorConfig attribute) statistics (GridContext attribute) (StatsCounter attribute) StatsCounter (class in nsaph_gis.compute_shape) status() (MedicareFile method) (MedparConverter method) status_message() (MedicareFile method) store() (in module nsaph.requests.hdf5_export) strategy (GridContext attribute) (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.task.ComputeShapesTask parameter), [1] (nsaph_gis.compute_shape.StatsCounter.prepare_stats parameter) (nsaph_gis.compute_shape.StatsCounter.process parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers parameter) (nsaph_gis.compute_shape.StatsCounter.process_layers_return_dict parameter) subclass (census.calculate_density.CensusDensityContext parameter) (census.cli.CensusContext parameter), [1] (census.do_qc.CensusQCContext parameter) (census.interpolate_data.CensusInterpolateContext parameter) (census.write_data.CensusWriteContext parameter) (cms.create_schema_config.CMSSchema parameter) (cms.table_population.PopulateConfig parameter) (epa.registry.EPAConfig parameter) (nsaph.dbt.dbt_config.DBTConfig parameter) (nsaph.loader.common.CommonConfig parameter), [1] (nsaph.loader.common.DBConnectionConfig parameter), [1] (nsaph.loader.common.DBTableConfig parameter), [1] (nsaph.loader.index_builder.IndexerConfig parameter) (nsaph.loader.loader_config.LoaderConfig parameter), [1] (nsaph.loader.monitor.DBMonitorConfig parameter) (nsaph_utils.utils.context.Context parameter), [1], [2], [3] (tests.test_cli_context.MadeUpContext parameter) submit() (BlockingThreadPoolExecutor method) sum_file (census.census_info.get_endpoint parameter), [1] (census.census_info.get_varlist parameter), [1] (census.query.get_census_data parameter), [1] supported_out_formats (DataPlan attribute) supported_tables (MedicareCombinedView attribute)

T

tab_indent() (in module nsaph.dictionary.element) Table (class in nsaph.data_model.model) (class in nsaph.dictionary.tables) table (DBTableConfig attribute), [1] (EPAConfig attribute) (GridContext attribute) (nsaph.data_model.utils.basename parameter) Table() (Inserter method) table_name (census.assemble_data.DataPlan.write_schema parameter), [1] table_sql() (MedicareCombinedView method) TableFingerprint (class in nsaph.dbt.create_test) TablePopulator (class in cms.table_population) target (epa.airnow_downloader.AirNowDownloader parameter) (epa.aqs_tools.download_data parameter) (nsaph_utils.utils.io_utils.is_downloaded parameter), [1] target() (DownloadGridmetTask method), [1] Test (class in nsaph_utils.qc.tester) test() (DBTRunner method) (in module nsaph.loader.introspector) test_approximate() (TableFingerprint method) test_case_sql() (TableFingerprint method) test_column() (TableFingerprint method) test_connection() (in module nsaph.db) test_custom_validate() (MyTestCase method) test_default_context() (MyTestCase method) test_exact() (TableFingerprint method) test_file (census.assemble_data.DataPlan.quality_check parameter), [1] test_ma_interpolation() (InterpolationTest method) test_tests() (QCTests method) Tester (class in nsaph_utils.qc.tester) TestFailedError tests.test_cli_context module

tests.test_interpolation module tests.test_qc module text (CType attribute) th (GridmetVariable attribute), [1] thread_initializer() (in module nsaph.util.executors) threads (LoaderConfig attribute), [1] tiger (CensusShapeCollection attribute) timer() (Inserter method) tmmn (GridmetVariable attribute), [1] tmmx (GridmetVariable attribute), [1] to_date() (ComputeGridmetTask method) to_dict() (AliasColumn method) (FTSColumn method) to_dot() (Column method) (ColumnLink method) to_fwf_column() (FTSColumn method) to_hdf5() (Dataset method) to_sql_type() (FTSColumn method) transfer() (in module epa.aqs_tools) transform() (PgPqSingleQuery method) transformer (nsaph_utils.utils.io_utils.write_csv parameter), [1] traverse() (MedicareLoader method) (MedicareSAS method) tvar (nsaph_utils.interpolation.interface.interpolate parameter) type (CMSSchema attribute) (FWFColumn attribute) (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] type_from_metadata() (Table method) type_name() (Dataset method) type_of_data (cms.fts2yaml.MedicaidFTS parameter) (cms.fts2yaml.MedicareFTS parameter) type_pg2pq() (PgPqBase static method)

U

ufqn() (Domain method) Union (class in nsaph.dictionary.tables) union() (TableFingerprint method) unquote() (in module nsaph.data_model.model) (Introspector static method) update() (ProfilingData method) (Registry method), [1], [2] update_medicaid() (Registry method)

update_medicare() (Registry method) update_mem_only() (ProfilingData method) update_mem_time() (ProfilingData method) url (epa.aqs_tools.download_data parameter) (nsaph_utils.utils.io_utils.as_content parameter), [1] (nsaph_utils.utils.io_utils.as_csv_reader parameter), [1] (nsaph_utils.utils.io_utils.as_stream parameter), [1] (nsaph_utils.utils.io_utils.is_downloaded parameter), [1]

V

Vacuum (class in nsaph.loader.vacuum) val (Test attribute) valid_values (nsaph_utils.utils.context.Argument parameter), [1], [2], [3] validate() (AirNowContext method) (AQSContext method) (CensusContext method), [1] (CensusInterpolateContext method) (Context method), [1], [2], [3] (FWFReader method) (GridContext method) (GridMETContext method) (LoaderConfig method), [1] (MadeUpContext method) (MedicareFile method) value (census.cli.CensusContext.validate parameter), [1] (census.interpolate_data.CensusInterpolateContext.validate parameter) (epa.airnow_ds_def.AirNowContext.validate parameter) (epa.aqs_ds_def.AQSContext.validate parameter) (gridmet.config.GridContext.validate parameter) (gridmet.config.GridMETContext.validate parameter) (nsaph.loader.loader_config.LoaderConfig.validate parameter), [1] (nsaph_utils.utils.context.Context.validate parameter), [1], [2], [3] (Record attribute) (tests.test_cli_context.MadeUpContext.validate parameter) values (MultiRecord attribute)

variable (gridmet.aggregator.Aggregator parameter) (gridmet.aggregator.GeoTiffAggregator parameter) (gridmet.aggregator.NetCDFAggregator parameter) (gridmet.gridmet_tools.get_atmos_url parameter), [1] (gridmet.gridmet_tools.get_nkn_url parameter), [1] (gridmet.gridmet_tools.get_variable parameter), [1] (gridmet.task.ComputeGridmetTask parameter), [1] (gridmet.task.ComputePointsTask parameter), [1] (gridmet.task.ComputeShapesTask parameter), [1] (gridmet.task.DownloadGridmetTask parameter), [1] (gridmet.task.DownloadGridmetTask.get_url parameter), [1] (gridmet.task.GridmetTask parameter), [1] (gridmet.task.GridmetTask.destination_file_name parameter), [1] VariableDef (class in census.assemble_data), [1] variables (census.assemble_data.DataPlan.calculate_densities parameter), [1] (census.query.get_census_data parameter), [1] (GridContext attribute) vec (nsaph_utils.interpolation.interpolate_ma.calc_weights parameter) (nsaph_utils.interpolation.interpolate_ma.get_indices parameter) verbose (DBConnectionConfig attribute), [1] verify() (Aggregator method) view_column_joined() (Domain method) view_column_spec() (Domain method) vpd (GridmetVariable attribute), [1] vs (GridmetVariable attribute), [1]

W

wait() (BlockingThreadPoolExecutor method) wait_for_completion() (BlockingThreadPoolExecutor method) warning (Severity attribute) width() (in module cms.fts2yaml) (in module cms.tools.mcr_file) window (PointInRaster attribute) with_thread_id (nsaph.init_logging parameter) write_app_outputs() (CWLAppRunnerGenerator method) write_csv() (in module nsaph_utils.utils.io_utils), [1] write_csv_header() (AirNowDownloader method) write_data() (DataPlan method), [1] write_execute_step() (CWLTestGenerator method) write_header (nsaph_utils.utils.io_utils.write_csv parameter), [1] write_header() (Aggregator method) (CWLGenerator method) write_in() (CWLTestGenerator method) write_inputs() (CWLGenerator method)

write_out() (CWLTestGenerator method) write_output() (CWLGenerator method) write_outputs() (CWLTestGenerator method) write_schema() (DataPlan method), [1] write_steps() (CWLTestGenerator method) write_test_inputs() (CWLTestGenerator method) write_test_script() (TableFingerprint method) write_verify_step() (CWLTestGenerator method) writer (epa.aqs_tools.transfer parameter) (gridmet.task.ComputeGridmetTask.compute_one_day parameter), [1] (gridmet.task.ComputePointsTask.compute_one_day parameter), [1] (gridmet.task.ComputeShapesTask.compute_one_day parameter), [1] (nsaph_utils.utils.io_utils.write_csv parameter), [1] writerow() (Collector method), [1] (CSVWriter method), [1] (ListCollector method), [1] WUSTLFile (class in pollution.wustl_file_processor)

X

x (nsaph_gis.annotator.GISAnnotator.join parameter) (PointInRaster attribute)

Y

y (GISDownloader attribute) (nsaph_gis.annotator.GISAnnotator.join parameter) (PointInRaster attribute) yaml_path (census.assemble_data.DataPlan parameter), [1] year (census.assemble_data.VariableDef.calculate_var parameter), [1] (census.assemble_data.VariableDef.do_query parameter), [1] (census.census_info.get_endpoint parameter), [1] (census.census_info.get_varlist parameter), [1] (census.query.get_census_data parameter), [1] (census.tigerweb.download_geometry parameter), [1] (gridmet.gridmet_tools.find_shape_file parameter), [1] (gridmet.gridmet_tools.get_atmos_url parameter), [1] (gridmet.gridmet_tools.get_nkn_url parameter), [1] (gridmet.task.ComputeGridmetTask parameter), [1] (gridmet.task.ComputePointsTask parameter), [1] (gridmet.task.ComputeShapesTask parameter), [1] (gridmet.task.DownloadGridmetTask parameter), [1] (gridmet.task.DownloadGridmetTask.get_url parameter), [1] (gridmet.task.GridmetTask parameter), [1] (gridmet.task.GridmetTask.destination_file_name parameter), [1] (gridmet.task.GridmetTask.find_shape_file parameter), [1]

years (AirNowContext attribute) (AQSContext attribute) (census.assemble_data.DataPlan parameter), [1] (Context attribute), [1], [2], [3] (epa.aqs_tools.collect_aqs_download_tasks parameter) ylabel (epa.aqs_tools.collect_daily_downloads parameter)

Z

zcta (Geography attribute) ZCTA_COLUMNS (Registry attribute)

ZCTA_GENZ_TEMPLATE (GISDownloader attribute) ZCTA_TIGER_URLs (GISDownloader attribute) zip (Geography attribute)